A successful approach to structured learning is to write the learning objective as a joint function of linear parameters and inference messages, and iterate between updates to each. This paper observes that if the inference problem is "smoothed" through the addition of entropy terms, for fixed messages, the learning objective reduces to a traditional (non-structured) logistic regression problem with respect to parameters. In these logistic regression problems, each training example has a bias term determined by the current set of messages. Based on this insight, the structured energy function can be extended from linear factors to any function class where an "oracle" exists to minimize a logistic loss.

We consider sequential treatment regimes where each unit is exposed to combinations of interventions over time. When interventions are described by qualitative labels, such as "close schools for a month due to a pandemic" or "promote this podcast to this user during this week", it is unclear which appropriate structural assumptions allow us to generalize behavioral predictions to previously unseen combinations of interventions. Standard black-box approaches mapping sequences of categorical variables to outputs are applicable, but they rely on poorly understood assumptions on how reliable generalization can be obtained, and may underperform under sparse sequences, temporal variability, and large action spaces. To approach that, we pose an explicit model for composition, that is, how the effect of sequential interventions can be isolated into modules, clarifying which data conditions allow for the identification of their combined effect at different units and time steps. We show the identification properties of our compositional model, inspired by advances in causal matrix factorization methods.

We study the problem of learning to track a large quantity of homogeneous objects such as cell tracking in cell culture study and developmental biology. Reliable cell tracking in time-lapse microscopic image sequences is important for modern biomedical research. Existing cell tracking methods are usually kept simple and use only a small number of features to allow for manual parameter tweaking or grid search. We propose a structured learning approach that allows to learn optimum parameters automatically from a training set. This allows for the use of a richer set of features which in turn affords improved tracking compared to recently reported methods on two public benchmark sequences.

A successful approach to structured learning is to write the learning objective as a joint function of linear parameters and inference messages, and iterate between updates to each. This paper observes that if the inference problem is "smoothed" through the addition of entropy terms, for fixed messages, the learning objective reduces to a traditional (non-structured) logistic regression problem with respect to parameters. In these logistic regression problems, each training example has a bias term determined by the current set of messages. Based on this insight, the structured energy function can be extended from linear factors to any function class where an "oracle" exists to minimize a logistic loss.

In many structured prediction problems, the highest-scoring labeling is hard to compute exactly, leading to the use of approximate inference methods. However, when inference is used in a learning algorithm, a good approximation of the score may not be sufficient. We show in particular that learning can fail even with an approximate inference method with rigorous approximation guarantees. There are two reasons for this. First, approximate methods can effectively reduce the expres- sivity of an underlying model by making it impossible to choose parameters that reliably give good predictions.

Models for near-rigid shape matching are typically based on distance-related features, in order to infer matches that are consistent with the isometric assumption. However, real shapes from image datasets, even when expected to be related by almost isometric" transformations, are actually subject not only to noise but also, to some limited degree, to variations in appearance and scale. In this paper, we introduce a graphical model that parameterises appearance, distance, and angle features and we learn all of the involved parameters via structured prediction. The outcome is a model for near-rigid shape matching which is robust in the sense that it is able to capture the possibly limited but still important scale and appearance variations. Our experimental results reveal substantial improvements upon recent successful models, while maintaining similar running times."

We study the problem of learning to track a large quantity of homogeneous objects such as cell tracking in cell culture study and developmental biology. Reliable cell tracking in time-lapse microscopic image sequences is important for modern biomedical research. Existing cell tracking methods are usually kept simple and use only a small number of features to allow for manual parameter tweaking or grid search. We propose a structured learning approach that allows to learn optimum parameters automatically from a training set. This allows for the use of a richer set of features which in turn affords improved tracking compared to recently reported methods on two public benchmark sequences.

We consider estimation of multiple high-dimensional Gaussian graphical models corresponding to a single set of nodes under several distinct conditions. We assume that most aspects of the networks are shared, but that there are some structured differences between them. Specifically, the network differences are generated from node perturbations: a few nodes are perturbed across networks, and most or all edges stemming from such nodes differ between networks. This corresponds to a simple model for the mechanism underlying many cancers, in which the gene regulatory network is disrupted due to the aberrant activity of a few specific genes. We propose to solve this problem using the structured joint graphical lasso, a convex optimization problem that is based upon the use of a novel symmetric overlap norm penalty, which we solve using an alternating directions method of multipliers algorithm.

Models for near-rigid shape matching are typically based on distance-related features, in order to infer matches that are consistent with the isometric assumption. However, real shapes from image datasets, even when expected to be related by almost isometric" transformations, are actually subject not only to noise but also, to some limited degree, to variations in appearance and scale. In this paper, we introduce a graphical model that parameterises appearance, distance, and angle features and we learn all of the involved parameters via structured prediction. The outcome is a model for near-rigid shape matching which is robust in the sense that it is able to capture the possibly limited but still important scale and appearance variations. Our experimental results reveal substantial improvements upon recent successful models, while maintaining similar running times." Papers published at the Neural Information Processing Systems Conference.

We study the problem of learning to track a large quantity of homogeneous objects such as cell tracking in cell culture study and developmental biology. Reliable cell tracking in time-lapse microscopic image sequences is important for modern biomedical research. Existing cell tracking methods are usually kept simple and use only a small number of features to allow for manual parameter tweaking or grid search. We propose a structured learning approach that allows to learn optimum parameters automatically from a training set. This allows for the use of a richer set of features which in turn affords improved tracking compared to recently reported methods on two public benchmark sequences.